Inputs Search

Use the following box to search over all alamo inputs and descriptions. This is the same list as in the Inputs section as generated by the autodoc system.

Note If searching for documentation on an alamo command that you found in an input file, remember that the prefix may not be included in this table. For instance, if you are looking for documentation on the following inputs

hc.heat.alpha = 1.0
el.nmodels = 2

the prefixes hc and el are not necessarily included, and you will not find them if you do an exact search. Instead, do a reverse search, starting with alpha and nmodels, then work out the prefixes out.

Parameter	Namespace / Class	Description
[prefix].type.xlo	BC type on the lower x edge (2d) face (3d)
[prefix].type.xhi	BC type on the upper x edge (2d) face (3d)
[prefix].type.ylo	BC type on the lower y edge (2d) face (3d)
[prefix].type.yhi	BC type on the upper y edge (2d) face (3d)
[prefix].type.zlo	BC type on the lower z face (processed but ignored in 2d to prevent unused input errors)
[prefix].type.zhi	BC type on the upper z face (processed but ignored in 2d to prevent unused input errors)
[prefix].val.xlo	BC value on the lower x edge (2d) face (3d)
[prefix].val.xhi	BC value on the upper x edge (2d) face (3d)
[prefix].val.ylo	BC value on the lower y edge (2d) face (3d)
[prefix].val.yhi	BC value on the upper y edge (2d) face (3d)
[prefix].val.zlo	BC value on the lower z face (processed but ignored in 2d to prevent unused input errors)
[prefix].val.zhi	BC value on the upper z face (processed but ignored in 2d to prevent unused input errors)
[prefix].type.xlo	BC type on the lower x edge (2d) face (3d)
[prefix].type.xhi	BC type on the upper x edge (2d) face (3d)
[prefix].type.ylo	BC type on the lower y edge (2d) face (3d)
[prefix].type.yhi	BC type on the upper y edge (2d) face (3d)
[prefix].type.zlo	BC type on the lower z face (processed but ignored in 2d to prevent unused input errors)
[prefix].type.zhi	BC type on the upper z face (processed but ignored in 2d to prevent unused input errors)
[prefix].type.xloylozlo	3D Corner
[prefix].type.xloylozhi	3D Corner
[prefix].type.xloyhizlo	3D Corner
[prefix].type.xloyhizhi	3D Corner
[prefix].type.xhiylozlo	3D Corner
[prefix].type.xhiylozhi	3D Corner
[prefix].type.xhiyhizlo	3D Corner
[prefix].type.xhiyhizhi	3D Corner
[prefix].type.ylozlo	3D Edge
[prefix].type.ylozhi	3D Edge
[prefix].type.yhizlo	3D Edge
[prefix].type.yhizhi	3D Edge
[prefix].type.zloxlo	3D Edge
[prefix].type.zloxhi	3D Edge
[prefix].type.zhixlo	3D Edge
[prefix].type.zhixhi	3D Edge
[prefix].type.xloylo	3D Edge / 2D Corner
[prefix].type.xloyhi	3D Edge / 2D Corner
[prefix].type.xhiylo	3D Edge / 2D Corner
[prefix].type.xhiyhi	3D Edge / 2D Corner
[prefix].type.xlo	3D Face / 2D Edge
[prefix].type.xhi	3D Face / 2D Edge
[prefix].type.ylo	3D Face / 2D Edge
[prefix].type.yhi	3D Face / 2D Edge
[prefix].type.zlo	3D Face
[prefix].type.zhi	3D Face
[prefix].val.xloylozlo	3D Corner
[prefix].val.xloylozhi	3D Corner
[prefix].val.xloyhizlo	3D Corner
[prefix].val.xloyhizhi	3D Corner
[prefix].val.xhiylozlo	3D Corner
[prefix].val.xhiylozhi	3D Corner
[prefix].val.xhiyhizlo	3D Corner
[prefix].val.xhiyhizhi	3D Corner
[prefix].val.ylozlo	3D Edge
[prefix].val.ylozhi	3D Edge
[prefix].val.yhizlo	3D Edge
[prefix].val.yhizhi	3D Edge
[prefix].val.zloxlo	3D Edge
[prefix].val.zloxhi	3D Edge
[prefix].val.zhixlo	3D Edge
[prefix].val.zhixhi	3D Edge
[prefix].val.xloylo	3D Edge / 2D Corner
[prefix].val.xloyhi	3D Edge / 2D Corner
[prefix].val.xhiylo	3D Edge / 2D Corner
[prefix].val.xhiyhi	3D Edge / 2D Corner
[prefix].val.xlo	3D Face / 2D Edge
[prefix].val.xhi	3D Face / 2D Edge
[prefix].val.ylo	3D Face / 2D Edge
[prefix].val.yhi	3D Face / 2D Edge
[prefix].val.zlo	3D Face
[prefix].val.zhi	3D Face
[prefix].type	Tension test type. (Only option right now is uniaxial_stress_clamp)
[prefix].disp	Applied displacement (can be interpolator)
[prefix].trac	Applied traction (can be interpolator)
[prefix].filename	BMP filename.	file path
[prefix].fit	How to position image in space	stretch fitheight fitwidth coord
[prefix].coord.lo	Location of lower-left corner in the domain
[prefix].coord.hi	Location of upper-right corner in the domain
[prefix].channel	Color channel to use	r g b R G B
[prefix].min	Scaling value - minimum	0.0
[prefix].max	Scaling value - maximum	255.0
[prefix].center	Coordinates (X Y Z) of the center of the square/cube.
[prefix].length	Side legnth of cuboid
[prefix].eps	Regularization value
[prefix].value	Array of constant values. The number of values should equal either 1 or N where N is the number of fab components	required
[prefix].x0	Coorinates of ellipse center
[prefix].eps	Diffuse boundary thickness	0.0
[prefix].A	DxD square matrix defining an ellipse.
[prefix].a	If A is not defined, then assume a sphere with radius a
[prefix].number_of_inclusions	Number of ellipses
[prefix].center	center of the ellipse
[prefix].x0	center of the ellipse
[prefix].A	either a vector containing ellipse radii, or a matrix defining the ellipse
[prefix].A	Same
[prefix].radius	Array of radii [depricated]
[prefix].eps	Regularization for smooth boundary
[prefix].invert	Flip the inside and the outside
[prefix].coord	coordinate system to use: “cartesian” (for x,y,z,t) and “polar” (for r, theta, z, t)
[prefix].number_of_inclusions	How many laminates (MUST be greater than or equal to 1).	1
[prefix].orientation	Vector normal to the interface of the laminate
[prefix].eps	Diffuse thickness
[prefix].mollifier	Type of mollifer to use (options: dirac, [gaussian])
[prefix].singlefab	Switch to mode where only one component is used.
[prefix].invert	Take the complement of the laminate
[prefix].nspheres	Total number of spheres
[prefix].matrix	Value for the matrix [0.0]
[prefix].inclusion	Value for the inclusion [1.0]
[prefix].eps	Diffuseness of the sphere boundary
[prefix].filename	Location of .xyzr file	file path
[prefix].verbose	Verbosity (used in parser only)
[prefix].mult	Coordinate multiplier
[prefix].invert	Coordinate multiplier
[prefix].x0	Coordinate offset
[prefix].wave_numbers	Wave numbers
[prefix].wave_amplitudes	Wave amplitudes
[prefix].normal	Which axis is normal to the interface (x,y,z)
[prefix].offset	Interface offset from origin
[prefix].reverse	If true, flip the interface (default:false)
[prefix].mollifier	Mollifier (options: dirac, [gaussian])
[prefix].eps	Magnitude of mollifier
[prefix].filename	BMP filename.	file path
[prefix].fit	How to fit. {options: stretch, fitheight, fitwidth}
[prefix].coord.lo	Lower-left coordinates of image in domain
[prefix].coord.hi	Upper-right coordinates of image in domain
[prefix].channel	Color channel to use (options: r, R, g, G, b, B, a, A)	r g b a R G B A
[prefix].min	Scaling value - minimum	0.0
[prefix].max	Scaling value - maximum	255.0
[prefix].mult	Multiplier	1.0
[prefix].radius	Radius of the sphere
[prefix].center	Vector location of the sphere center
[prefix].inside	Value of the field inside the sphere
[prefix].outside	Value of the field outside teh sphere
[prefix].type	Type - can be cylinder oriented along the x, y, z directions or full sphere.
[prefix].nr	Number of real (cosin) waves
[prefix].ni	Number of imaginary (sin) waves
[prefix].dim	Spatial dimension
[prefix].alpha	Multiplier
[prefix].xs	x location of points
[prefix].ys	y location of points
[prefix].number_of_grains	Number of grains
[prefix].alpha	Value to take in the region [1.0]
[prefix].seed	Random seed to use
max_step	Number of iterations before ending (default is maximum possible int)	2147483647
stop_time	Simulation time before ending	required
timestep	Nominal timestep on amrlev = 0	required
restart	Name of restart file to READ from
restart_cell	Name of cell-fab restart file to read from
restart_node	Name of node-fab restart file to read from
ignore	Space-separated list of entries to ignore
amr.regrid_int	Regridding interval in step numbers	2
amr.base_regrid_int	Regridding interval based on coarse level only	0
amr.plot_int	Interval (in timesteps) between plotfiles (Default negative value will cause the plot interval to be ignored.)	-1
amr.plot_dt	Interval (in simulation time) between plotfiles (Default negative value will cause the plot dt to be ignored.)	-1.0
amr.plot_file	Output file	output
amr.cell.all	Turn on to write all output in cell fabs (default: off)	false
amr.cell.any	Turn off to prevent any cell based output (default: on)	true
amr.node.all	Turn on to write all output in node fabs (default: off)	false
amr.node.any	Turn off to prevent any node based output (default: on)	true
amr.abort_on_nan	Abort if a plotfile contains nan or inf.	true
amr.max_plot_level	Specify a maximum level of refinement for output files (NO REFINEMENT)	-1
amr.nsubsteps	Number of substeps to take on each level (default: 2)
amr.nsubsteps	Number of substeps to take on each level (set all levels to this value)	required
dynamictimestep.on	activate dynamic CFL-based timestep
dynamictimestep.verbose	how much information to print	0 1
dynamictimestep.nprevious	number of previous timesteps for rolling average	5
dynamictimestep.cfl	dynamic teimstep CFL condition	1.0
dynamictimestep.min	minimum timestep size allowed shen stepping dynamically	timestep
dynamictimestep.max	maximum timestep size allowed shen stepping dynamically	timestep
amr.thermo.int	Integration interval (1)	1
amr.thermo.plot_int	Interval (in timesteps) between writing (Default negative value will cause the plot interval to be ignored.)	-1
amr.thermo.plot_dt	Interval (in simulation time) between writing (Default negative value will cause the plot dt to be ignored.)	-1.0
explicitmesh.on	Use explicit mesh instead of AMR	0
[prefix].refinement_threshold	Criterion for mesh refinement [0.01]	0.01
[prefix].ch.L	Value for \(L\) (mobility)	1.0
[prefix].ch.eps	Value for \(\epsilon\) (diffuse boundary width)	0.1
[prefix].ch.grad	Value for \(\kappa\) (Interface energy parameter)	1.0
[prefix].ch.chempot	Value for \(\lambda\) (Chemical potential coefficient)	1.0
[prefix].ch.direction	Force directional growth: 0=no growth, 1=only positive, -1=only negative	0 1 -1
[prefix].alpha.ic.type	Set the initial condition for the alpha field	sphere constant expression bmp png random psread
[prefix].alpha	Pre-multiplier of “m” barrier height	required
[prefix].delta	Anisotropy factor	required
[prefix].gamma	Anisotropic temperature coupling factor	required
[prefix].eps	Diffuse boundary width	required
[prefix].tau	Diffusive timescale	required
[prefix].heat.refinement_threshold	Refinement criteria for temperature	0.01
[prefix].phi.refinement_threshold	Refinement criteria for phi	0.01
[prefix].timestep	Simulation timestep	1.0e-4
[prefix].pf.eps	Burn width thickness	0.0
[prefix].pf.kappa	Interface energy param	0.0
[prefix].pf.gamma	Scaling factor for mobility	1.0
[prefix].pf.lambda	Chemical potential multiplier	0.0
[prefix].pf.w1	Unburned rest energy	0.0
[prefix].pf.w12	Barrier energy	0.0
[prefix].pf.w0	Burned rest energy	0.0
[prefix].amr.ghost_cells	number of ghost cells in all fields	2
[prefix].geometry.x_len	Domain x length	0.001
[prefix].geometry.y_len	Domain y length	0.001
[prefix].pf.eta.bc.type	Boundary conditions for phase field order params	constant
[prefix].pf.eta.ic.type	phase field initial condition after comment	constant expression
[prefix].eta.ic.type	phase field initial condition	laminate constant expression bmp png
[prefix].thermal.on	IO::ParmParse pp(“thermal”); Whether to use the Thermal Transport Model	false
[prefix].elastic.on	Whether to use Neo-hookean Elastic model	0
[prefix].thermal.bound	System Initial Temperature	0.0
[prefix].elastic.traction	Body force	0.0
[prefix].elastic.phirefinement	Phi refinement criteria	1
[prefix].thermal.rho_ap	AP Density	required
[prefix].thermal.rho_htpb	HTPB Density	required
[prefix].thermal.k_ap	AP Thermal Conductivity	required
[prefix].thermal.k_htpb	HTPB Thermal Conductivity	required
[prefix].thermal.cp_ap	AP Specific Heat	required
[prefix].thermal.cp_htpb	HTPB Specific Heat	required
[prefix].thermal.q0	Baseline heat flux	0.0
[prefix].thermal.m_ap	AP Pre-exponential factor for Arrhenius Law	required
[prefix].thermal.m_htpb	HTPB Pre-exponential factor for Arrhenius Law	required
[prefix].thermal.E_ap	AP Activation Energy for Arrhenius Law	required
[prefix].thermal.E_htpb	HTPB Activation Energy for Arrhenius Law	required
[prefix].thermal.hc	Used to change heat flux units	1.0
[prefix].thermal.massfraction	Systen AP mass fraction	0.8
[prefix].thermal.mlocal_ap	AP mass flux reference value	0.0
[prefix].thermal.mlocal_htpb	HTPB mass flux reference value	0.0
[prefix].thermal.mlocal_comb	AP/HTPB mass flux reference value	0.0
[prefix].thermal.T_fluid	Temperature of the Standin Fluid	300.0
[prefix].thermal.disperssion1	K; dispersion variables are use to set the outter field properties for the void grain case.
[prefix].thermal.disperssion2	rho; dispersion variables are use to set the outter field properties for the void grain case.
[prefix].thermal.disperssion3	cp; dispersion variables are use to set the outter field properties for the void grain case.
[prefix].thermal.modeling_ap	Scaling factor for AP thermal conductivity (default = 1.0)	1.0
[prefix].thermal.modeling_htpb	Scaling factor for HTPB thermal conductivity (default = 1.0)	1.0
[prefix].thermal.temp.bc.type	Temperature boundary condition	constant
[prefix].laser.ic.type	laser initial condition	constant expression
[prefix].temp.ic.type	thermal initial condition	constant expression bmp png
[prefix].pressure.P	Constant pressure value	1.0
[prefix].pressure.a1	Surgate heat flux model paramater - AP	required
[prefix].pressure.a2	Surgate heat flux model paramater - HTPB	required
[prefix].pressure.a3	Surgate heat flux model paramater - Total	required
[prefix].pressure.b1	Surgate heat flux model paramater - AP	required
[prefix].pressure.b2	Surgate heat flux model paramater - HTPB	required
[prefix].pressure.b3	Surgate heat flux model paramater - Total	required
[prefix].pressure.c1	Surgate heat flux model paramater - Total	required
[prefix].pressure.mob_ap	Whether to include pressure to the arrhenius law	0
[prefix].pressure.dependency	Whether to use pressure to determined the reference Zeta	1
[prefix].pressure.h1	Surgate heat flux model paramater - Homogenized	1.81
[prefix].pressure.h2	Surgate heat flux model paramater - Homogenized	1.34
[prefix].pressure.r_ap	AP power pressure law parameter (r*P^n)	required
[prefix].pressure.r_htpb	HTPB power pressure law parameter (r*P^n)	required
[prefix].pressure.r_comb	AP/HTPB power pressure law parameter (r*P^n)	required
[prefix].pressure.n_ap	AP power pressure law parameter (r*P^n)	required
[prefix].pressure.n_htpb	HTPB power pressure law parameter (r*P^n)	required
[prefix].pressure.n_comb	AP/HTPB power pressure law parameter (r*P^n)	required
[prefix].variable_pressure	Whether to compute the pressure evolution	0
[prefix].homogeneousSystem	Whether to initialize Phi with homogenized properties	0
[prefix].amr.refinement_criterion	Refinement criterion for eta field	0.001
[prefix].amr.refinement_criterion_temp	Refinement criterion for temperature field	0.001
[prefix].amr.refinament_restriction	Eta value to restrict the refinament for the temperature field	0.1
[prefix].amr.phi_refinement_criterion	Refinement criterion for phi field [infinity]	1.0e100
[prefix].small	Lowest value of Eta.	1.0e-8
[prefix].phi.ic.type	IC type (psread, laminate, constant)	psread laminate expression constant bmp png
[prefix].phi.ic.psread.eps	value.ic_phicell = new IC::PSRead(value.geom, pp, “phi.ic.psread”); AP/HTPB interface length	1.0e-5
[prefix].phi.zeta_0	Reference interface length for heat integration	1.0e-5
[prefix].phi.ic.laminate.eps	value.ic_phicell = new IC::Laminate(value.geom, pp, “phi.ic.laminate”); AP/HTPB interface length	1.0e-5
[prefix].phi.zeta_0	Reference interface length for heat integration	1.0e-5
[prefix].phi.zeta_0	value.ic_phicell = new IC::Expression(value.geom, pp, “phi.ic.expression”); Reference interface length for heat integration	1.0e-5
[prefix].phi.zeta	AP/HTPB interface length	1.0e-5
[prefix].phi.zeta_0	value.ic_phicell = new IC::Constant(value.geom, pp, “phi.ic.constant”); Reference interface length for heat integration	1.0e-5
[prefix].phi.zeta	AP/HTPB interface length	1.0e-5
[prefix].phi.zeta_0	value.ic_phicell = new IC::BMP(value.geom, pp, “phi.ic.bmp”); Reference interface length for heat integration	1.0e-5
[prefix].phi.zeta	AP/HTPB interface length	1.0e-5
[prefix].phi.zeta_0	Reference interface length for heat integration	1.0e-5
[prefix].phi.zeta	AP/HTPB interface length	1.0e-5
[prefix].Tref	Initial temperature for thermal expansion computation	300.0
crack.ic.type	Type of crack {notch,ellipsoid}
[prefix].heat.alpha	Diffusion coefficient \(\alpha\). This is an example of a required input variable - - program will terminate unless it is provided.	required
[prefix].heat.refinement_threshold	Criterion for mesh refinement. This is an example of a default input variable. The default value is provided here, not in the definition of the variable.	0.01
[prefix].ic.type	Initial condition type.	constant sphere expression
[prefix].bc.temp.type	Select BC object for temperature	constant expression
[prefix].nmodels	Number of elastic model varieties	1
[prefix].eta_ref_threshold	Refinement threshold for eta field	0.01
[prefix].ref_threshold	Refinement threshold for strain gradient	0.01
[prefix].model_neumann_boundary	Explicity impose neumann condition on model at domain boundaries (2d only)	false
[prefix].ic.type	Select the initial condition for eta	constant ellipse voronoi bmp png expression psread
[prefix].eta.reset_on_regrid	Whether to re-initialize eta when re-gridding occurs. Default is false unless eta ic is set, then default is. true.	true
[prefix].psi.ic.type	Select initial condition for psi field	ellipse constant expression psread png
[prefix].psi.reset_on_regrid	Whether to re-initialize psi when re-gridding occurs. Default is false unless a psi ic is set, then default is true.	true
[prefix].trac_normal.ic.type	Read in IC for the “normal traction” field (applied at diffuse boundaries)	ellipse constant expression psread
[prefix].pf.number_of_grains	Number of grain fields (may be more if using different IC)	2
[prefix].pf.M	Mobility	required
[prefix].pf.mu	Phase field \(\mu\)	required
[prefix].pf.gamma	Phase field \(\gamma\)	required
[prefix].pf.sigma0	Initial GB energy if not using anisotropy	required
[prefix].pf.l_gb	Mobility	required
[prefix].pf.elastic_df	Determine whether to use elastic driving force	false
[prefix].pf.elastic_mult	Multiplier of elastic energy	1.0
[prefix].pf.threshold.value	Value used for thresholding kinetic relation	0.0
[prefix].pf.threshold.chempot	Whether to include chemical potential in threshold	false
[prefix].pf.threshold.boundary	Whether to include boundary energy in threshold	false
[prefix].pf.threshold.corner	Whether to include corner regularization in threshold	false
[prefix].pf.threshold.lagrange	Whether to include lagrange multiplier in threshold	false
[prefix].pf.threshold.mechanics	Whether to include mechanical driving force in threshold	false
[prefix].pf.threshold.type	Type of thresholding to use	continuous chop
[prefix].amr.max_level	Maximum AMR level	required
[prefix].amr.ref_threshold	Phase field refinement threshold	0.1
[prefix].mechanics.tstart	Elasticity	0.0
[prefix].lagrange.on	Lagrange multiplier method for enforcing volumes	false
[prefix].lagrange.lambda	Lagrange multiplier value	required
[prefix].lagrange.vol0	Prescribed volume	required
[prefix].lagrange.tstart	Lagrange multipler start time	0.0
[prefix].sdf.on	synthetic driving force (SDF)	false
[prefix].sdf.val	value of SDF for each grain
[prefix].sdf.tstart	time to begin applying SDF	0.0
[prefix].anisotropy.on	Turn on	false
[prefix].anisotropy.beta	Regularization para m	required
[prefix].anisotropy.tstart	Time to turn on anisotropy	required
[prefix].anisotropy.timestep	Modify timestep when turned on	required
[prefix].anisotropy.plot_int	Modify plot_int when turned on	-1
[prefix].anisotropy.plot_dt	Modify plot_dt when turned on	-1.0
[prefix].anisotropy.thermo_int	Modify thermo int when turned on	-1
[prefix].anisotropy.thermo_plot_int	Modify thermo plot int when turned on	-1
[prefix].anisotropy.elastic_int	Frequency of elastic calculation	-1
[prefix].anisotropy.regularization	Type of regularization to use	k12 wilmore
[prefix].anisotropy.type	Type of GB to use	abssin sin read sh
[prefix].bc.eta.type	Boundary condition for eta	constant
[prefix].ic.type	Initial condition for the order parameter eta	constant perturbedinterface voronoi expression sphere ellipse random
[prefix].anisotropic_kinetics.on	Anisotropic mobility	0
[prefix].anisotropic_kinetics.tstart	simulation time when anisotropic kinetics is activated	0.0
[prefix].anisotropic_kinetics.mobility	file containing anisotropic mobility data	file path
[prefix].anisotropic_kinetics.threshold	file containing anisotropic mobility data	file path
crack.ic.type	Crack type to use {notch}
[prefix].alpha	Diffusion coefficient
[prefix].psi.ic.type	Initial condition for psi field	ellipse constant
[prefix].eta_ref_threshold	Refinement threshold based on eta	0.01
[prefix].alpha	\(\alpha\) parameter	1.0
[prefix].beta	\(\beta\) parameter	1.0
[prefix].gamma	\(\gamma\) parameter	1.0
[prefix].volume0frac	Prescribed volume fraction	0.5
[prefix].volume0	Prescribed total vlume	0.5
[prefix].type	Type of mecahnics to use. Static: do full implicit solve. Dynamic: evolve dynamic equations with explicit dynamics Disable: do nothing.	disable static dynamic
[prefix].time_evolving	Treat mechanics fields as changing in time. [false] You should use this if you care about other physics driven by the output of this integrator.	false
[prefix].plot_disp	Include displacement field in output	true
[prefix].plot_rhs	Include right-hand side in output	true
[prefix].plot_psi	Include \(\psi\) field in output	true
[prefix].plot_stress	Include stress in output	true
[prefix].plot_strain	Include strain in output	true
[prefix].viscous.mu_dashpot	Dashpot damping (damps velocity)	0.0
[prefix].viscous.mu_newton	Newtonian viscous damping (damps velocity gradient)	0.0
[prefix].velocity.ic.type	Initializer for RHS	none expression
[prefix].bc.type	Select the mechanical boundary conditions	constant tensiontest expression
[prefix].print_model	Print out model variables (if enabled by model)	false
[prefix].rhs.type	Initializer for RHS	none trig constant
[prefix].interval	Timestep interval for elastic solves (default - solve every time)	0
[prefix].max_coarsening_level	Maximum multigrid coarsening level (default - none, maximum coarsening)	-1
[prefix].print_residual	Whether to include residual output field	false
[prefix].elastic_ref_threshold	Whether to refine based on elastic solution	0.01
[prefix].zero_out_displacement	Set this to true to zero out the displacement before each solve. (This is a temporary fix - we need to figure out why this is needed.)	false
[prefix].tstart	Time to start doing the elastic solve (by default, start immediately)	-1.0
[prefix].G_c	Fracture energy
[prefix].zeta	Lengthscale regularization
[prefix].mobility	Mobility (speed)
[prefix].threshold	Threshold
[prefix].gtype	Type of g function to use {square, multiwell, 4c3, squarep, squarepexp, cubicm}
[prefix].wtype	Type o w function to use {square, multiwell, multiwell2, 4c3}
[prefix].Gc0	Min Gc (fracture energy) value
[prefix].Gc1	Max Gc (fracture energy)value
[prefix].theta0	Angle offset
[prefix].zeta	Regularization
[prefix].mobility	Crack mobiilty
[prefix].threshold	Threshold for kinetics
[prefix].gtype	Type of g function to use {square, multiwell, 4c3, squarep, squarepexp, cubicm}
[prefix].wtype	Type o w function to use {square, multiwell, multiwell2, 4c3}
[prefix].theta0	Angle offset (degrees)
[prefix].sigma0	Minimum energy
[prefix].sigma1	Energy multiplier
[prefix].filename	Filename containing GB data	file path
[prefix].theta0	Theta offset (degrees)
[prefix].phi0	Phi offset (radians)
[prefix].sigma0	Minimum energy value
[prefix].sigma1	Energy multiplier
[prefix].regularization	Type of regularization to use: {wilhelm,k23}
[prefix].theta0	Theta offset (degrees)
[prefix].sigma0	Minimum energy
[prefix].sigma1	Energy multiplier
[prefix].n	Frequency number (integer)
[prefix].F0	Eigenstrain matrix. Can be defined in 2D or 3D.
[prefix].lame	Lame modulus
[prefix].shear	Shear modulus
[prefix].E	Elastic modulus
[prefix].nu	Poisson’s ratio
[prefix].E	Young’s modulus
[prefix].shear	Shear modulus
[prefix].E	Young’s modulus
[prefix].lame	Lame parameter
[prefix].nu	Poisson’s ratio
[prefix].shear	Shear modulus
[prefix].lambda	Lame parameter
[prefix].nu	Poisson’s ratio
[prefix].bulk	Bulk modulus
[prefix].shear	Shear modulus
[prefix].F0	Eigendeformation gradient
[prefix].sigma0	J2 Yield criterion	1.0
[prefix].hardening	Hardening coefficient (negative value disables rate hardening)	-1.0
[prefix].ratecoeff	Rate coefficient (negative value disables rate hardening)	-1.0
[prefix].lambda	Lame constant
[prefix].mu	Shear modulus
[prefix].E	Young’s modulus
[prefix].nu	Poisson’s ratio
[prefix].yield	Yield strength
[prefix].hardening	Hardening constant
[prefix].theta	Hardening theta
[prefix].tau_crss	Critical resolved shear stress \(\tau_{crss}\)
[prefix].gammadot0	Rate hardening coefficient \(\dot{\gamma}_0\)	1.0
[prefix].m_rate_inv	Inverse of the hardening exponent \(\frac{1}{m}\)	0.5
[prefix].tstart	Time to activate plastic slip	0.0
[prefix].F0	Large-deformation eigendeformation (Identity = no deformation)
[prefix].eps0	Small-deformation eigendeformation (Zero = no deformation)
[prefix].shear	Shear modulus
[prefix].kappa	Bulk modulus
[prefix].mu	Alternative input for shear modulus
[prefix].kappa	Bulk modulus
[prefix].shear	Shear modulus
[prefix].lame	Lame parameter
[prefix].E	Young’s modulus
[prefix].nu	Poisson’s ratio
[prefix].F0	Large-strain eigendeformation (Identity = no deformation)
[prefix].eps0	Small-strain eigendeformation (Zero = no deformation)
[prefix].C11	Set::Scalar C11 = 1.68, C12 = 1.21, C44 = 0.75; Elastic constant (default: 1.68)
[prefix].C12	Elastic constant (default: 1.21)
[prefix].C44	Elastic constant (default: 0.75)
[prefix].phi1	Bunge Euler angle \(\phi_1\)
[prefix].Phi	Bunge Euler angle \(\Phi\)
[prefix].phi2	Bunge Euler angle \(\phi_2\)
[prefix].C11	Elastic constant	1.68
[prefix].C12	Elastic constant	1.21
[prefix].C44	Elastic constant	0.75
[prefix].anglefmt	specify whether using radians or degrees	radians degrees
[prefix].phi1	Bunge Euler angle \(\phi_1\) about x axis	0.0
[prefix].Phi	Bunge Euler angle \(\Phi\) about z axis	0.0
[prefix].phi2	Bunge Euler angle \(\phi_2\) about x axis	0.0
[prefix].C11	Elastic constant	required
[prefix].C12	Elastic constant	required
[prefix].C13	Elastic constant	required
[prefix].C33	Elastic constant	required
[prefix].C44	Elastic constant	required
[prefix].phi1	Bunge Euler angle \(\phi_1\)	0.0
[prefix].Phi	Bunge Euler angle \(\Phi\)	0.0
[prefix].phi2	Bunge Euler angle \(\phi_2\)	0.0
[prefix].planestress	Whether or not to use the plane stress approximation.
[prefix].lame	Lame parameter
[prefix].shear	Shear modulus (redundant with “mu”)
[prefix].lambda	Lame parameter
[prefix].mu	Shear modulus (redundant with “shear”)
[prefix].E	Elastic modulus
[prefix].nu	Poisson’s ratio
alpha	Coefficient for the Laplacian	1.0
[prefix].str	Interpolator string used when Parsed from queryclass.
[prefix].small	Regularization offset value used in near-singular elastic solves. It should be small - if it is too large, you will get better convergence but less correct values!
[prefix].max_iter	Max number of iterations to perform before erroring out
[prefix].bottom_max_iter	Max number of iterations on the bottom solver
[prefix].max_fmg_iter	Max number of F-cycle iterations to perform
[prefix].fixed_iter	Number of fixed iterations to perform before exiting gracefully
[prefix].verbose	Verbosity of the solver (1-5)
[prefix].pre_smooth	Number of smoothing operations before bottom solve (2)
[prefix].post_smooth	Number of smoothing operations after bottom solve (2)
[prefix].final_smooth	Number of final smoothing operations when smoother is used as bottom solver (8)
[prefix].bottom_smooth	Additional smoothing after bottom CG solver (0)
[prefix].bottom_solver	The method that is used for the multigrid bottom solve (cg, bicgstab, smoother)
[prefix].bottom_tol_rel	Relative tolerance on bottom solver
[prefix].bottom_tol_abs	Absolute tolerance on bottom solver
[prefix].tol_rel	Relative tolerance
[prefix].tol_abs	Absolute tolerance
[prefix].omega	Omega (used in gauss-seidel solver)
[prefix].average_down_coeffs	Whether to average down coefficients or use the ones given. (Setting this to true is important for fracture.)
[prefix].normalize_ddw	Whether to normalize DDW when calculating the diagonal. This is primarily used when DDW is near-singular - like when there is a “void” region or when doing phase field fracture.
[prefix].dump_on_fail	If set to true, output diagnostic multifab information whenever the MLMG solver fails to converge. (Note: you must also set amrex.signalhandling=0 and amrex.throw_exception=1 for this to work.)
[prefix].abort_on_fail	If set to false, MLMG will not die if convergence criterion is not reached. (Note: you must also set amrex.signalhandling=0 and amrex.throw_exception=1 for this to work.)
[prefix].nriters	Number of newton-raphson iterations.
[prefix].nrtolerance	Tolerance to use for newton-raphson convergence
plot_file	Name of directory containing all output data